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A Combined Approach of High-Throughput Sequencing and Degradome Analysis Reveals Tissue Specific Expression of MicroRNAs and Their Targets in Cucumber

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成果类型:
期刊论文
作者:
Mao, Weihua*;Li, Zeyun;Xia, Xiaojian;Li, Yadan;Yu, Jingquan
通讯作者:
Mao, Weihua
作者机构:
[Mao, Weihua; Yu, Jingquan; Xia, Xiaojian] Zhejiang Univ, Dept Hort, Hangzhou 310003, Zhejiang, Peoples R China.
[Mao, Weihua; Li, Zeyun] Zhejiang Univ, Ctr Anal & Measurement, Hangzhou 310003, Zhejiang, Peoples R China.
[Li, Yadan] Hunan Agr Univ, Hunan Agr Bioengn Res Inst, Changsha, Hunan, Peoples R China.
通讯机构:
[Mao, Weihua] Z
Zhejiang Univ, Dept Hort, Hangzhou 310003, Zhejiang, Peoples R China.
语种:
英文
关键词:
MicroRNAs;Cucumber;Transcription factors;Leaves;RNA sequence analysis;RNA sequencing;Cellular stress responses;Transcriptional control
期刊:
PLOS ONE
ISSN:
1932-6203
年:
2012
卷:
7
期:
3
页码:
e33040-null
基金类别:
National Basic Research Program of ChinaNational Basic Research Program of China [2009CB119000]; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [30971701]; Foundation for the Author of National Excellent Doctoral Dissertation of PR ChinaFoundation for the Author of National Excellent Doctoral Dissertation of China [200766]
机构署名:
本校为其他机构
院系归属:
生物科学技术学院
摘要:
MicroRNAs (miRNAs) are endogenous small RNAs playing an important regulatory function in plant development and stress responses. Among them, some are evolutionally conserved in plant and others are only expressed in certain species, tissue or developmental stages. Cucumber is among the most important greenhouse species in the world, but only a limited number of miRNAs from cucumber have been identified and the experimental validation of the related miRNA targets is still lacking. In this study, two independent small RNA libraries from cucumber leaves and roots were constructed, respectively, a...

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