Transcriptomic Profiling of Cold Stress-Induced Differentially Expressed Genes in Seedling Stage of Indica Rice

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成果类型：

期刊论文

作者：

Yan, Tao;Sun, Meng;Su, Rui;Wang, Xiaozhong;Lu, Xuedan;...

通讯作者：

Tang, Wenbang;Zhang, GL;Tang, WB

作者机构：

[Tang, Wenbang; Zhang, GL; Wang, Xiaozhong; Xiao, Yunhua; Deng, Huabing; Sun, Meng; Liu, Xiong; Su, Rui; Lu, Xuedan; Yan, Tao; Zhang, Guilian] Hunan Agr Univ, Coll Agron, Changsha 410128, Peoples R China.

[Tang, Wenbang; Zhang, GL; Wang, Xiaozhong; Xiao, Yunhua; Deng, Huabing; Sun, Meng; Liu, Xiong; Su, Rui; Lu, Xuedan; Yan, Tao; Zhang, Guilian] Hunan Prov Key Lab Rice & Rapeseed Breeding Dis Re, Changsha 410128, Peoples R China.

[Tang, Wenbang] Hunan Acad Agr Sci, Hunan Hybrid Rice Res Ctr, Changsha 410128, Peoples R China.

[Tang, Wenbang] State Key Lab Hybrid Rice, Changsha 410128, Peoples R China.

通讯机构：

[Tang, WB; Zhang, GL ; Tang, WB ] H

Hunan Agr Univ, Coll Agron, Changsha 410128, Peoples R China.

Hunan Prov Key Lab Rice & Rapeseed Breeding Dis Re, Changsha 410128, Peoples R China.

Hunan Acad Agr Sci, Hunan Hybrid Rice Res Ctr, Changsha 410128, Peoples R China.

State Key Lab Hybrid Rice, Changsha 410128, Peoples R China.

语种：

英文

关键词：

cold stress;RNA-seq;rice;cold-transcription factors;gene ontology;KEGG pathway analysis

期刊：

Plants-Basel

ISSN：

2223-7747

年：

2023

卷：

期：

页码：

2675-

DOI：

10.3390/plants12142675

基金类别：

The work was supported by the National Natural Science Foundation of China (Grant nos. 31871599 and 31901528), the Natural Science Foundation of Hunan province (2021JJ30350), the Major Project of Agricultural Biological Breeding (2022ZD0400402), the Hunan postgraduate scientific research innovation project (CX20200672), and the Science and Technology Innovation Program of Hunan Province (2023NK1010).

机构署名：

本校为第一且通讯机构

院系归属：

农学院

摘要：

Cold stress significantly constrains the growth, development, productivity, and distribution of rice, particularly the indica cultivar, known for its susceptibility to cold, limiting its cultivation to specific regions. This study investigated the genes associated with cold responsiveness in the roots of two indica cultivars, SQSL (cold-tolerant) and XZX45 (cold-susceptible), through transcriptome dynamics analysis during the seedling stage. The analysis identified 8144 and 6427 differentially expressed genes (DEGs) in XZX45 and SQSL, respectively. Among these DEGs, 4672 (G2) were shared by bo...

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Transcriptomic Profiling of Cold Stress-Induced Differentially Expressed Genes in Seedling Stage of Indica Rice

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