The brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

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期刊论文

作者：

Liu, Shengyi*;Liu, Yumei;Yang, Xinhua;Tong, Chaobo;Edwards, David;...

通讯作者：

Liu, Shengyi

作者机构：

[Huang, Junyan; Hu, Qiong; Hu, Zhiyong; Yu, Jingyin; Liu, Jing; Huang, Shunmou; Wang, Xinfa; Dong, Caihua; Tong, Chaobo; Liu, Shengyi; Zhao, Meixia; Mei, Desheng; Huang, Yi; Shi, Jiaqin; Hua, Wei] Chinese Acad Agr Sci, Oil Crops Res Inst, Key Lab Biol & Genet Improvement Oil Crops, Minist Agr PRC, Wuhan 430062, Peoples R China.

[Wu, Jian; Wang, Xiaowu; Fang, Zhiyuan; Liu, Yumei; Cheng, Feng; Wang, Wanxin; Zhuang, Mu; Zhang, Yangyong; Yang, Limei] Chinese Acad Agr Sci, Inst Vegetables & Flowers, Key Lab Biol & Genet Improvement Hort Crops, Minist Agr, Beijing 10081, Peoples R China.

[Wu, Zhangyan; Yang, Xinhua; Lu, Changxin; Yang, Linfeng; Huang, Yin; Wang, Junyi; Xu, Xun; Liu, Wenbin; Pan, Shengkai; Liang, Xinming; Yue, Zhen; Zhou, Qing; Wang, Jun; Min, Jiumeng; Li, Wanshun; Wang, Zhuo] Beijing Genome Inst Shenzhen, Shenzhen 518083, Peoples R China.

[Edwards, David; Ruperao, Pradeep] Univ Queensland, Australian Ctr Plant Funct Genom, Sch Agr & Food Sci, Brisbane, Qld 4072, Australia.

[Parkin, Isobel A. P.] Agr & Agri Food Canada, Saskatoon, SK S7N OX2, Canada.

通讯机构：

[Liu, Shengyi] C

Chinese Acad Agr Sci, Oil Crops Res Inst, Key Lab Biol & Genet Improvement Oil Crops, Minist Agr PRC, Wuhan 430062, Peoples R China.

语种：

英文

期刊：

Nature Communications

ISSN：

2041-1723

年：

2014

卷：

期：

页码：

3930

DOI：

10.1038/ncomms4930

基金类别：

National Basic Research Program of ChinaNational Basic Research Program of China [011CB109300, 2012CB113906, 2012CB723007, 2006CB101600]; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [3067134, 30671119, 31301039]; National High Technology Research and Development ProgramNational High Technology Research and Development Program of China [2013AA102602, 2012AA100105, 2012AA100104]; China Agriculture Research System [CARS-13, CARS-25-A]; Core Research Budget of the Non-profit Governmental Research Institution [1610172010005]; Special Fund for Agro-scientific Research in the Public Interest [201103016]; China-Australia collaboration project [2010DFA31730]; UK Biotechnology and Biological Sciences Research CouncilUK Research & Innovation (UKRI)Biotechnology and Biological Sciences Research Council (BBSRC) [BB/E017363/1]; Australian Research CouncilAustralian Research Council [LP0882095, LP0883462, DP0985953, LP110100200]; Next-Generation BioGreen 21 ProgramRural Development Administration (RDA) [PJ008944, PJ008202]; US National Science FoundationNational Science Foundation (NSF) [IOS 0638418, DBI 0849896, MCB 1021718]; Direct For Biological SciencesNational Science Foundation (NSF)NSF - Directorate for Biological Sciences (BIO) [1021718] Funding Source: National Science Foundation; Biotechnology and Biological Sciences Research CouncilUK Research & Innovation (UKRI)Biotechnology and Biological Sciences Research Council (BBSRC) [BB/E017363/1] Funding Source: researchfish

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本校为其他机构

院系归属：

农学院

摘要：

Polyploidization has provided much genetic variation for plant adaptive evolution, but the mechanisms by which the molecular evolution of polyploid genomes establishes genetic architecture underlying species differentiation are unclear. Brassica is an ideal model to increase knowledge of polyploid evolution. Here we describe a draft genome sequence of Brassica oleracea, comparing it with that of its sister species B. rapa to reveal numerous chromosome rearrangements and asymmetrical gene loss in duplicated genomic blocks, asymmetrical amplification of transposable elements, differential gene c...

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The brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

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