A chromosome-level genome assembly provides insights into the environmental adaptability and outbreaks of Chlorops oryzae

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成果类型：

期刊论文

作者：

Zhou, Ailin;Huang, Cong;Li, Yi;Li, Xinwen;Zhang, Zhengbing;...

通讯作者：

Qiu, L.;Li, Y.

作者机构：

[Qiu, Lin; Li, Youzhi; Zhou, Ailin; Ding, Wenbing; Xue, Jin; He, Hualiang] Hunan Agr Univ, Coll Plant Protect, Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Changsha 410128, Peoples R China.

[Li, Youzhi; Zhou, Ailin; Ding, Wenbing] Hunan Prov Engn & Technol Res Ctr Biopesticide &, Changsha 410128, Peoples R China.

[Huang, Cong] Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Minist Agr,Shenzhen Branch, Genome Anal Lab,Guangdong Lab Lingnan Modern Agr, Shenzhen 518120, Peoples R China.

[Li, Xinwen; Zhang, Zhengbing; Li, Yi] Agr & Rural Dev Hunan Prov, Plant Protect & Inspect Stn, Changsha 410005, Peoples R China.

通讯机构：

[Li, Youzhi; Qiu, Lin] H

Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China<&wdkj&>Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China<&wdkj&>Hunan Provincial Engineering & Technology Research Center for Biopesticide and Formulation Processing, Changsha, China

语种：

英文

期刊：

Communications Biology

ISSN：

2399-3642

年：

2022

卷：

期：

页码：

881

DOI：

10.1038/s42003-022-03850-7

基金类别：

We thank Annoroad Gene Technology (Beijing) Co., Ltd. for technical assistance. This work was supported by the Changsha Municipal Natural Science Foundation [grant number kp2007019], the Double first-class construction project of Hunan Agricultural University [grant number SYL2019029], and the Hunan Provincial Department of Education Project [grant number 18B096].

机构署名：

本校为第一机构

院系归属：

植物保护学院

摘要：

A chromosome-level genome assembly for the rice pest, Chlorops oryzae, pinpoints molecular pathways that might contribute toward increased outbreaks for this important crop pest. Chlorops oryzae is a pest of rice that has caused severe damage to crops in major rice-growing areas in recent years. We generated a 447.60 Mb high-quality chromosome-level genome with contig and scaffold N50 values of 1.17 Mb and 117.57 Mb, respectively. Hi-C analysis anchored 93.22% scaffolds to 4 chromosomes. The relatively high expression level of Heat Shock Proteins (HSPs) and antioxidant genes in response to the...

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A chromosome-level genome assembly provides insights into the environmental adaptability and outbreaks of Chlorops oryzae

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