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Informative gene selection and direct classification of tumor based on chi-square test of pairwise gene interactions

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成果类型:
期刊论文
作者:
Zhang, Hongyan;Li, Lanzhi;Luo, Chao;Sun, Congwei;Chen, Yuan;...
通讯作者:
Yuan, Zheming
作者机构:
[Zhang, Hongyan; Li, Lanzhi; Chen, Yuan; Dai, Zhijun; Yuan, Zheming; Sun, Congwei] Hunan Prov Key Lab Crop Germplasm Innovat & Utili, Changsha 410128, Hunan, Peoples R China.
[Zhang, Hongyan; Luo, Chao] Hunan Agr Univ, Coll Informat Sci & Technol, Changsha 410128, Hunan, Peoples R China.
[Zhang, Hongyan; Li, Lanzhi; Chen, Yuan; Dai, Zhijun; Yuan, Zheming; Sun, Congwei] Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Changsha 410128, Hunan, Peoples R China.
通讯机构:
[Yuan, Zheming] H
Hunan Prov Key Lab Crop Germplasm Innovat & Utili, Changsha 410128, Hunan, Peoples R China.
语种:
英文
期刊:
BioMed Research International
ISSN:
2314-6133
年:
2014
卷:
2014
页码:
589290
基金类别:
National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [61300130]; Doctoral Foundation of the Ministry of Education of ChinaMinistry of Education, China [20124320110002]; Postdoctoral Science Foundation of Hunan ProvinceChina Postdoctoral Science Foundation [2012RS4039]; Science Research Foundation of the National Science and Technology Major Project [2012BAD35B05]
机构署名:
本校为其他机构
院系归属:
信息科学技术学院
摘要:
In efforts to discover disease mechanisms and improve clinical diagnosis of tumors, it is useful to mine profiles for informative genes with definite biological meanings and to build robust classifiers with high precision. In this study, we developed a new method for tumor-gene selection, the Chi-square test-based integrated rank gene and direct classifier (χ 2-IRG-DC). First, we obtained the weighted integrated rank of gene importance from chi-square tests of single and pairwise gene interactions. Then, we sequentially introduced the ranked g...

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