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An Efficient Feature Selection Algorithm for Gene Families Using NMF and ReliefF

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成果类型:
期刊论文
作者:
Liu, Kai;Chen, Qi;Huang, Guo-Hua
通讯作者:
Guo-Hua Huang
作者机构:
[Chen, Qi; Huang, Guo-Hua; Liu, Kai] Hunan Agr Univ, Coll Plant Protect, Changsha 410128, Peoples R China.
[Chen, Qi; Huang, Guo-Hua; Liu, Kai] Hunan Agr Univ, Hunan Prov Key Lab Biol & Control Plant Dis & Inse, Nongda Rd, Changsha 410128, Peoples R China.
[Liu, Kai] Hunan Agr Univ, Coll Informat & Intelligence, Changsha 410128, Peoples R China.
通讯机构:
[Guo-Hua Huang] C
College of Plant Protection, Hunan Agricultural University, Changsha 410128, China<&wdkj&>Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, Hunan Agricultural University, Nongda Road, Furong District, Changsha 410128, China<&wdkj&>Author to whom correspondence should be addressed.
语种:
英文
关键词:
gene family;NMF-ReliefF;feature selection;classification;insect genome
期刊:
Genes
ISSN:
2073-4425
年:
2023
卷:
14
期:
2
页码:
421-
基金类别:
This research was supported by the National Key R&D Program of China (2022YFD1401200), National Natural Science Foundation of China (31970450, 32111540167), China Agriculture Research System (CARS-23-C08), the Double First-class Construction Project of Hunan Agricultural University, and the Scientific Research Fund of Hunan Provincial Education Department (20C0975).
机构署名:
本校为第一机构
院系归属:
植物保护学院
摘要:
Gene families, which are parts of a genome’s information storage hierarchy, play a significant role in the development and diversity of multicellular organisms. Several studies have focused on the characteristics of gene families, such as function, homology, or phenotype. However, statistical and correlation analyses on the distribution of gene family members in the genome have yet to be conducted. Here, a novel framework incorporating gene family analysis and genome selection based on NMF-ReliefF is reported. Specifically, the proposed method...

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