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A Comparative Transcriptomics Approach to Analyzing the Differences in Cold Resistance in Pomacea canaliculata between Guangdong and Hunan

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成果类型:
期刊论文
作者:
Liu, Jing;Sun, Zhiying;Wang, Zhi*;Peng, Yuande*
通讯作者:
Wang, Zhi;Peng, Yuande
作者机构:
[Liu, Jing; Wang, Zhi] Hunan Agr Univ, Coll Resources & Environm, Changsha 410128, Hunan, Peoples R China.
[Sun, Zhiying] Hunan Agr Univ, Coll Biosci & Biotechnol, Changsha 410128, Hunan, Peoples R China.
[Wang, Zhi] Hunan Normal Univ, Coll Life Sci, Changsha 410081, Hunan, Peoples R China.
[Peng, Yuande] Chinese Acad Agr Sci, Inst Bast Fiber Crops, Changsha 410205, Hunan, Peoples R China.
通讯机构:
[Wang, Zhi] H
[Peng, Yuande] C
Hunan Agr Univ, Coll Resources & Environm, Changsha 410128, Hunan, Peoples R China.
Hunan Normal Univ, Coll Life Sci, Changsha 410081, Hunan, Peoples R China.
Chinese Acad Agr Sci, Inst Bast Fiber Crops, Changsha 410205, Hunan, Peoples R China.
语种:
英文
关键词:
adenosine triphosphatase (potassium sodium);caspase 9;glucose 6 phosphate dehydrogenase;glutathione peroxidase;glycogen synthase;glycogen synthase 1;heat shock protein 70;inositol 3 phosphate synthase;interleukin 1beta converting enzyme;nicotinamide adenine dinucleotide adenosine diphosphate ribosyltransferase;synthetase;transcriptome;unclassified drug;transcriptome;amino acid metabolism;Article;cluster analysis;cold tolerance;comparative study;down regulation;energy metabolism;genetic screening;high throughput sequencing;muscle tissue;nonhuman;Pomacea canaliculata;transcriptome sequencing;transcriptomics;upregulation;adaptation;animal;biology;China;cold;gastropod;gene expression profiling;gene expression regulation;gene ontology;gene regulatory network;genotype environment interaction;physiology;procedures;Adaptation, Biological;Animals;China;Cold Temperature;Computational Biology;Gastropoda;Gene Expression Profiling;Gene Expression Regulation;Gene Ontology;Gene Regulatory Networks;Gene-Environment Interaction;High-Throughput Nucleotide Sequencing;Transcriptome
期刊:
Journal of Immunology Research
ISSN:
2314-8861
年:
2020
卷:
2020
页码:
1-9
基金类别:
Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [11871208, 31472017, 31272339]; Open Research Fund of Key Laboratory of Tropical Disease Control and Research, Ministry of Education in China [2018 kfkt03]; Hunan Provincial Education DepartmentHunan Provincial Education Department [18A024]
机构署名:
本校为第一且通讯机构
院系归属:
资源环境学院
生物科学技术学院
摘要:
Pomacea canaliculata, known as an invasive freshwater snail, is also called a golden apple snail; its survival and expansion are greatly affected by temperature. In this study, high-throughput sequencing (RNA-seq) was used to perform comparative transcriptome analysis on the muscular tissue (G_M) of snails in Guangdong and Hunan. Differential gene screening was performed with FDR 1 as the threshold, and a total of 1,368 differential genes were obtained (671 genes showed upregulation in snails from Guangdong, and 697 genes displayed upregulation...

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