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QSAR Study on the toxicities of alcohols and phenols based on minimal redundancy maximal relevance and distance correlation feature selection methods

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成果类型:
期刊论文
作者:
Deng Xiaolong;Tan Siqiao;Chen Yuan*;Yuan Zheming
通讯作者:
Chen Yuan
作者机构:
[Chen Yuan; Yuan Zheming; Deng Xiaolong] Hunan Prov Key Lab Germplasm Innovat & Utilizat C, Changsha 410128, Hunan, Peoples R China.
[Yuan Zheming; Deng Xiaolong] Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Changsha 410128, Hunan, Peoples R China.
[Tan Siqiao] Hunan Agr Univ, Coll Informat Sci & Technol, Changsha 410128, Hunan, Peoples R China.
通讯机构:
[Chen Yuan] H
Hunan Prov Key Lab Germplasm Innovat & Utilizat C, Changsha 410128, Hunan, Peoples R China.
语种:
英文
关键词:
Distance correlation;Feature selection;Minimal redundancy and maximal relevance;Quantitative structure-activity relationship;Support vector regression
期刊:
Research Journal of Biotechnology
ISSN:
2278-4535
年:
2016
卷:
11
期:
6
页码:
81-90
基金类别:
Hunan Provincial Natural Science Foundation of ChinaNatural Science Foundation of Hunan Province [14JJ2082]; Research Foundation for the Doctoral Program of Education Department [20124320110002]; Science and Technology Program of Changsha [K1406018-21]
机构署名:
本校为其他机构
院系归属:
信息科学技术学院
摘要:
Toxicity prediction can provide important information for environmental protection. The toxicity predictions of 228 alcohols and phenols were performed by quantitative structure-activity relationship (QSAR). Feature selection can reduce the training time of modelling, improve the prediction accuracy and enhance the interpretability of a model. Both dependent variables (toxicity) and independent variables (molecular descriptors) of the QSAR data sets are usually continuous variables. The well-known feature selection method, minimal redundancy maximal relevance (mRMR) can eliminate redundancy an...

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