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Sesame: A New Bioinformatics Semantic Workflow Design System

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成果类型:
期刊论文、会议论文
作者:
Zhang, Lu*;Wang, Yunsheng;Xuan, Pengfei;Duvall, Alexander;Lowe, Jonathan;...
通讯作者:
Zhang, Lu
作者机构:
[Zhang, Lu; Wang, Yanyan; Luo, Feng; Subramanian, Arvind; Duvall, Alexander; Xuan, Pengfei; Srimani, Pradip K.; Lowe, Jonathan] Clemson Univ, Sch Comp, Clemson, SC 29634 USA.
[Wang, Yanyan] Hunan Agr Univ, Coll Plant Protection, Changsha 410128, Hunan, Peoples R China.
[Duan, Yongping] US Horticultural Res Lab, Agr Res Serv, Ft Pierce, FL 34945 USA.
通讯机构:
[Zhang, Lu] C
Clemson Univ, Sch Comp, Clemson, SC 29634 USA.
语种:
英文
关键词:
semantic;workflow design;bioinformatics
期刊:
2013 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM)
ISSN:
2156-1125
年:
2013
页码:
504-508
会议名称:
IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM)
会议论文集名称:
IEEE International Conference on Bioinformatics and Biomedicine-BIBM
会议时间:
DEC 18-21, 2013
会议地点:
Shanghai, PEOPLES R CHINA
会议主办单位:
[Zhang, Lu;Xuan, Pengfei;Duvall, Alexander;Lowe, Jonathan;Wang, Yanyan;Subramanian, Arvind;Srimani, Pradip K.;Luo, Feng] Clemson Univ, Sch Comp, Clemson, SC 29634 USA.^[Wang, Yanyan] Hunan Agr Univ, Coll Plant Protection, Changsha 410128, Hunan, Peoples R China.^[Duan, Yongping] US Horticultural Res Lab, Agr Res Serv, Ft Pierce, FL 34945 USA.
会议赞助商:
IEEE, IEEE Comp Soc, Tongji Univ, IEEE Comp Soc Tech Comm Life Sci, China Acad Chinese Med Sci, Shanghai Assoc Syst Simulat
主编:
Li, GZ Kim, S Hughes, M McLachlan, G Sun, H Hu, X Ressom, H Liu, B Liebman, M
出版地:
10662 LOS VAQUEROS CIRCLE, PO BOX 3014, LOS ALAMITOS, CA 90720-1264 USA
出版者:
IEEE COMPUTER SOC
ISBN:
978-1-4799-1309-1; 978-1-4799-1310-7
基金类别:
Citrus Research and Development Foundation; National Science FoundationNational Science Foundation (NSF) [CCF-0832582, DBI-0960586]
机构署名:
本校为其他机构
院系归属:
植物保护学院
摘要:
Biologists have become increasingly dependent on bioinformatics tools to analyze and interpret their datasets. The number, variety and complexity of these bioinformatics tools have increased dramatically and they have become more and more computationally complex, expensive and resource intensive. Powerful workflow design systems have been developed to automate the execution of set of tools for a specific task. However, designing a complex executable workflow using such tools still requires considerable computational expertise or the help from a...

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