The haplotype-resolved reference genome of lemon (Citrus limon L. Burm f.)

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成果类型：

期刊论文

作者：

Mario, Di Guardo;Marco, Moretto;Mirko, Moser;Chiara, Catalano;Michela, Troggio;...

通讯作者：

Gaetano Distefano<&wdkj&>Luca Bianco

作者机构：

[Mario, Di Guardo; Chiara, Catalano; Gaetano, Distefano; Stefano, La Malfa] Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy

[Marco, Moretto; Mirko, Moser; Michela, Troggio; Alessandro, Cestaro; Luca, Bianco] Research and Innovation Centre, San Michele All’ Adige, Trento, Italy

[Ziniu Deng] College of Horticulture and Landscape, Hunan Agricultural University, Changsha, China

[Marco, Caruso] Research Centre for Olive, Fruit and Citrus Crops, CREA, Acireale, Italy

[Aalessandra, Gentile] Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy<&wdkj&>College of Horticulture and Landscape, Hunan Agricultural University, Changsha, China

通讯机构：

[Gaetano Distefano] D

[Luca Bianco] R

Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy<&wdkj&>Research and Innovation Centre, San Michele All’ Adige, Trento, Italy

语种：

英文

关键词：

Citrus;Haplotype-resolved assembly;Gene annotation;Oxford Nanopore

期刊：

TREE GENETICS & GENOMES

ISSN：

1614-2942

年：

2021

卷：

期：

页码：

1-12

DOI：

10.1007/s11295-021-01528-5

基金类别：

Projects ‘Development of Resistance Inductor against Citrus Vascular Pathogens’ (Sviluppo di Induttori di Resistenza a Patogeni Vascolari negli Agrumi, S.I.R.P.A., http://www.progettosirpa.it/home, 08CT7211000254) and ‘Fruit Crops Resilience to Climate Change in the Mediterranean Basin’ (FREECLIMB, https://primafreeclimb.com/) and ‘Valutazione di genotipi di agrumi per l’individuazione di fonti di resistenza a stress biotici e abiotici’ (Linea 2 del Piano della Ricerca di Ateneo 2020, University of Catania) are supporting the proposed work related to new biotechnological approaches carried out to unlock genetic basis of mal secco resistance and to obtain new tolerant genotypes. The APC was funded by Fondi di Ateneo 2020–2022, University of Catania, linea Open Access. Mario Di Guardo took part on this work in the frame of the PON ‘AIM: Attrazione e Mobilità Internazionale’, project number 1848200–2.

机构署名：

本校为第一机构

院系归属：

园艺园林学院

摘要：

Lemon (Citrus limon (L.) Burm. f.) is an evergreen tree belonging to the genus Citrus. The fruits are particularly prized for the organoleptic and nutraceutical properties of the juice and for the quality of the essential oils in the peel. Herein, we report, for the first time, the release of a high-quality reference genome of the two haplotypes of lemon. The sequencing has been carried out coupling Illumina short reads and Oxford Nanopore data leading to the definition of a primary and an alternative assembly characterized by a genome size of 312.8 Mb and 324.74 Mb respectively, which agree w...

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The haplotype-resolved reference genome of lemon (Citrus limon L. Burm f.)

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