Gene co-expression network analysis identifies hub genes associated with different tolerance under calcium deficiency in two peanut cultivars

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成果类型：

期刊论文

作者：

Tang, Kang;Li, Lin;Zhang, Bowen;Zhang, Wei;Zeng, Ningbo;...

通讯作者：

Zhang, Hao;Liu, Dengwang;Luo, ZN

作者机构：

[Li, Lin; Liu, Dengwang; Zhang, Bowen; Luo, ZN; Zhang, Hao; Luo, Zinan; Zhang, H; Tang, Kang; Zeng, Ningbo] Hunan Agr Univ, Coll Agr, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

[Li, Lin; Liu, Dengwang; Luo, ZN; Zhang, Hao; Luo, Zinan; Zhang, H; Zeng, Ningbo] Hunan Agr Univ, Arid Land Crop Res Inst, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

[Li, Lin; Liu, Dengwang; Luo, ZN; Zhang, Hao; Luo, Zinan; Zhang, H; Zeng, Ningbo] Hunan Peanut Engn & Technol Res Ctr, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

[Zhang, Wei] Hunan Agr Univ, Coll Plant Protect, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

通讯机构：

[Liu, DW; Luo, ZN ; Zhang, H] H

Hunan Agr Univ, Coll Agr, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

Hunan Agr Univ, Arid Land Crop Res Inst, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

Hunan Peanut Engn & Technol Res Ctr, 1 Nongda Rd, Changsha 410128, Hunan, Peoples R China.

语种：

英文

关键词：

Peanut;Transcriptome;Weighted gene co-expression network analysis (WGCNA);Differentially expressed genes (DEGs);Hub genes

期刊：

BMC Genomics

ISSN：

1471-2164

年：

2023

卷：

期：

页码：

1-16

DOI：

10.1186/s12864-023-09436-9

基金类别：

This work was supported by the National Key R&D Project (No.2018YFD1000900), Chinese Agricultural Research System (CARS-13), Hunan Key R&D Project (No. 2021NK2005) and Hunan Modern Agricultural Research System. This work was also funded by General Scientific Research Project of Education Department of Hunan Province (19C0930) and Crop Science Excellent Talent Fund of Hunan Agricultural University (YXQN2018-21).

机构署名：

本校为第一且通讯机构

院系归属：

农学院

植物保护学院

摘要：

Peanut is an economically-important oilseed crop and needs a large amount of calcium for its normal growth and development. Calcium deficiency usually leads to embryo abortion and subsequent abnormal pod development. Different tolerance to calcium deficiency has been observed between different cultivars, especially between large and small-seed cultivars. In order to figure out different molecular mechanisms in defensive responses between two cultivars, we treated a sensitive (large-seed) and a tolerant (small-seed) cultivar with different calcium levels. The transcriptome analysis identified a...

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Gene co-expression network analysis identifies hub genes associated with different tolerance under calcium deficiency in two peanut cultivars

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