Noncoding and coding transcriptome analysis reveals the regulation roles of long noncoding RNAs in fruit development of hot pepper (Capsicum annuum L.)

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作者信息关键词期刊信息基础信息归属信息摘要

成果类型：

期刊论文

作者：

Ou, Lijun;Liu, Zhoubin;Zhang, Zhuqing;Wei, Ge;Zhang, Yuping;...

通讯作者：

Ma, Yanqing;Zou, Xuexiao

作者机构：

[Lv, Junheng; Dai, Xiongze; Yang, Bozhi; Zhou, Shudong; Kang, Linyu; Chen, Wenchao; Zhang, Zhuqing; Ma, Yanqing; Zou, Xuexiao; Liu, Zhoubin; Li, Xuefeng; Ou, Lijun; Wei, Ge; Yang, Sha; Liu, Yuhua] Hunan Vegetable Res Inst, Changsha 410125, Hunan, Peoples R China.

[Lv, Junheng; Kang, Linyu; Liu, Zhoubin; Zou, Xuexiao; Liu, Yuhua] Hunan Univ, Grad Sch, Longping Branch, Changsha 410125, Hunan, Peoples R China.

[Zhang, Yuping] Hunan Agr Univ, Coll Resources & Environm, Changsha 410125, Hunan, Peoples R China.

通讯机构：

[Ma, YQ; Zou, XX; Zou, Xuexiao] H

Hunan Vegetable Res Inst, Changsha 410125, Hunan, Peoples R China.

Hunan Univ, Grad Sch, Longping Branch, Changsha 410125, Hunan, Peoples R China.

语种：

英文

关键词：

Long non-coding RNAs (lncRNAs);Fruit development;Fruit quality;RNA-seq;Capsicum annuum L.

期刊：

Plant Growth Regulation

ISSN：

0167-6903

年：

2017

卷：

期：

页码：

141-156

DOI：

10.1007/s10725-017-0290-3

基金类别：

China Agriculture Research System [CARS-25-A-8]

机构署名：

本校为其他机构

院系归属：

资源环境学院

摘要：

Long non-coding RNAs (lncRNAs) have been shown to play critical regulatory roles in diverse biological processes in plants. However, the presence of lncRNAs and their potential functions in hot pepper are still unknown. Using strand-specific RNA-sequencing, a total of 2505 putative lncRNAs were identified in the fruits of hot pepper. The lncRNAs were transcribed from all pepper chromosomes and 95.37% of them originated from intergenic regions. And 1066 lncRNAs were differentially expressed among the four samples during pepper fruit development. Many potential protein-coding (PC) genes targeted...

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Noncoding and coding transcriptome analysis reveals the regulation roles of long noncoding RNAs in fruit development of hot pepper (Capsicum annuum L.)

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