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Genome comparison of two Magnaporthe oryzae field isolates reveals genome variations and potential virulence effectors

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成果类型:
期刊论文
作者:
Chen, Chenxi;Lian, Bi;Hu, Jinnan;Zhai, Huanchen;Wang, Xingxing;...
通讯作者:
Wang, Zonghua
作者机构:
[Chen, Chenxi; Venu, R. C.; Wang, Guo-Liang; Hu, Jinnan; Lian, Bi; Mitchell, Thomas K.] Ohio State Univ, Dept Plant Pathol, Columbus, OH 43210 USA.
[Chen, Meilian; Wang, Zonghua; Wang, Xingxing; Lian, Bi; Zhai, Huanchen; Wang, Baohua] Fujian Agr & Forestry Univ, Minist Educ, Key Lab Biopesticide & Chem Biol, Fuzhou 350002, Fujian, Peoples R China.
[Wang, Guo-Liang; Liu, Erming; Wang, Zhilong] Hunan Agr Univ, Coll Agron, Hunan Prov Key Lab Crop Germplasm Innovat & Utili, Changsha 410128, Hunan, Peoples R China.
[Zhai, Huanchen] Henan Univ Technol, Coll Bioengn, Zhengzhou 450001, Henan, Peoples R China.
[Wang, Zonghua] Fujian Agr & Forestry Univ, Minist Educ, Key Lab Biopesticide & Chem Biol, 15 Shangxiadian Rd, Fuzhou 350002, Fujian, Peoples R China.
通讯机构:
[Wang, Zonghua] F
Fujian Agr & Forestry Univ, Minist Educ, Key Lab Biopesticide & Chem Biol, 15 Shangxiadian Rd, Fuzhou 350002, Fujian, Peoples R China.
语种:
英文
关键词:
Magnaporthe oryzae;Next generation sequencing;Genome comparison;Candidate effectors identification;Isolate-specific genome content
期刊:
BMC Genomics
ISSN:
1471-2164
年:
2013
卷:
14
期:
1
页码:
1-12
基金类别:
We are grateful to the OSU Molecular Cellular Imaging Center (MCIC) for performing Illumina sequencing. We thank Dr. Kun Huang at the OSU Department of Biomedical Informatics for providing access to the high performance computing cluster. This work is funded by 973 project No. 2012CB114001 and NSFC No.91231121 to Z Wang, and from the Program for Innovative Research Team in University (IRT1239), Chinese Ministry of Education, China.
机构署名:
本校为其他机构
院系归属:
农学院
摘要:
Background: Rice blast caused by the fungus Magnaporthe oryzae is an important disease in virtually every rice growing region of the world, which leads to significant annual decreases of grain quality and yield. To prevent disease, resistance genes in rice have been cloned and introduced into susceptible cultivars. However, introduced resistance can often be broken within few years of release, often due to mutation of cognate avirulence genes in fungal field populations. Results: To better understand the pattern of mutation of M. oryzae field i...

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