Transcriptome data reveal gene clusters and key genes in pepper response to heat shock

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成果类型：

期刊论文

作者：

Tang, Bingqian;Li, Xiumin;Zhang, Xinhao;Yin, Qinbiao;Xie, LingLing;...

通讯作者：

Liu, F.;Dai, X.

作者机构：

[Yin, Qinbiao; Zhang, Xinhao; Dai, Xiongze; Zou, Xuexiao; Liu, Feng; Tang, Bingqian] Hunan Agr Univ, Coll Hort, Changsha, Peoples R China.

[Zou, Xuexiao; Liu, Feng; Tang, Bingqian; Li, Xiumin] Grad Sch Hunan Univ, Longping Branch, Changsha, Peoples R China.

[Dai, Xiongze; Zou, Xuexiao; Liu, Feng; Tang, Bingqian] ERC Germplasm Innovat & New Variety, Breeding Hort Crops, Changsha, Peoples R China.

[Dai, Xiongze; Zou, Xuexiao; Liu, Feng; Tang, Bingqian; Xie, LingLing] Key Lab Vegetable Biol Hunan Prov, Changsha, Peoples R China.

通讯机构：

[Liu, F.; Dai, X.] C

College of Horticulture, China

语种：

英文

关键词：

pepper;Heat stress;Gene Expression;heat shock factors (Hsfs);Clustering analysis

期刊：

FRONTIERS IN PLANT SCIENCE

ISSN：

1664-462X

年：

2022

卷：

页码：

946475

DOI：

10.3389/fpls.2022.946475

基金类别：

This work was supported by the Laboratory of Lingnan Modern Agriculture Project (NT2021004), Special Funds for Construction of Innovative Provinces in Hunan Province (2021NK1006), and Joint Funds of the National Natural Science Foundation of China (Grant No. U21A20230).

机构署名：

本校为第一机构

院系归属：

园艺园林学院

摘要：

Climate change and global warming pose a great threat to plant growth and development as well as crop productivity. To better study the genome-wide gene expression under heat, we performed a time-course (0.5 to 24 h) transcriptome analysis in the leaf and root of 40-day-old pepper plants under 40°C as well as in control plants. Clustering analysis (K-means) showed that the expression of 29,249 genes can be grouped into 12 clusters with distinct expression dynamics under stress. Gene ontology (GO) enrichment analysis and transcription factor (T...

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Transcriptome data reveal gene clusters and key genes in pepper response to heat shock

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