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Integrating CRISPR-Cas12a with catalytic hairpin assembly as a logic gate biosensing platform for the detection of polychlorinated biphenyls in water samples

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成果类型:
期刊论文
作者:
Deng, Fang;Pan, Jiafeng;Chen, Manjia;Liu, Zhi;Chen, Junhua;...
通讯作者:
Zhi Liu<&wdkj&>Junhua Chen
作者机构:
[Liu, Zhi; Pan, Jiafeng; Deng, Fang] Hunan Agr Univ, Coll Biosci & Biotechnol, Changsha 410128, Peoples R China.
[Chen, Manjia; Pan, Jiafeng; Deng, Fang; Chen, Junhua] Guangdong Acad Sci, Natl Reg Joint Engn Res Ctr Soil Pollut Control &, Guangdong Key Lab Integrated Agroenvironm Pollut C, Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Peoples R China.
[Liu, Chengshuai; Chen, Manjia] Guangdong Lab Lingnan Modern Agr, Guangzhou 510642, Peoples R China.
[Liu, Chengshuai] Chinese Acad Sci, Inst Geochem, State Key Lab Environm Geochem, Guiyang 550081, Peoples R China.
通讯机构:
[Zhi Liu] C
[Junhua Chen] N
National-Regional Joint Engineering Research Center for Soil Pollution Control and Remediation in South China, Guangdong Key Laboratory of Integrated Agro-environmental Pollution Control and Management, Institute of Eco-environmental and Soil Sciences, Guangdong Academy of Sciences, Guangzhou 510650, China<&wdkj&>College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha 410128, China
语种:
英文
关键词:
CRISPR-Cas12a;Catalytic hairpin assembly;Intelligent detection;Logic gate;Polychlorinated biphenyl
期刊:
Science of The Total Environment
ISSN:
0048-9697
年:
2023
卷:
881
页码:
163465
基金类别:
We first employed PCB72 as the model target to construct a YES logic gate (Fig. 1). The absence and presence of the target were defined as 0 and 1, respectively. The trigger DNA (DNA2) was blocked by DNA1. In the presence of PCB72, the specific binding between the aptamer (DNA1) and PCB72 will release the blocked DNA2. The free DNA2 thus can be used as the trigger DNA to initiate the CHA cycle amplification reaction. The hairpin probe 1 (H1) can be opened by the hybridization with DNA2 through
机构署名:
本校为第一机构
院系归属:
生物科学技术学院
摘要:
Polychlorinated biphenyls (PCBs) are ubiquitous persistent organic pollutants that cause harmful effects on environmental safety and human health. There is an urgent need to develop an intelligent method for PCBs sensing. In this work, we proposed a logic gate biosensing platform for simultaneous detection of multiple PCBs. 2,3',5,5'-tetrachlorobiphenyl (PCB72) and 3,3',4,4'-tetrachlorobiphenyl (PCB77) were used as the two inputs to construct biocomputing logic gates. We used 0 and 1 to encode the inputs and outputs. The aptamer was used to recognize the inputs and release the trigger DNA. A c...

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