Genomes of cultivated and wild Capsicum species provide insights into pepper domestication and population differentiation

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成果类型：

期刊论文

作者：

Liu, Feng;Zhao, Jiantao;Sun, Honghe;Xiong, Cheng;Sun, Xuepeng;...

通讯作者：

Zou, XX;Wu, Shan;Fei, ZJ

作者机构：

[Xu, Hao; Dai, Xiongze; Zou, Xuexiao; Zhao, Jiantao; Liu, Zhoubing; Ou, Lijun; Liu, Feng; Tang, Bingqian; Suo, Huan; Yang, Bozhi; Xiong, Cheng; Ma, Yanqing; Yuan, Fang; Wang, Jin; Wang, Zhongyi; Pei, Zhenming; Hu, Bowen] Hunan Agr Univ, Coll Hort, Engn Res Ctr Germplasm Innovat & New Varieties Bre, Key Lab Vegetable Biol Hunan Prov, Changsha, Peoples R China.

[Fei, ZJ; Wang, Xin; Zhao, Jiantao; Fei, Zhangjun; Sun, Xuepeng; Wu, Shan; Sun, Honghe] Boyce Thompson Inst Plant Res, Ithaca, NY USA.

[Sun, Honghe] Cornell Univ, Sch Integrat Plant Sci, Plant Biol Sect, Ithaca, NY USA.

[Jarret, Robert] USDA Agr Res Serv, Plant Genet Resources Conservat Unit, Griffin, GA USA.

[Li, Xuefeng; Yang, Sha; Zhou, Shudong] Hunan Acad Agr Sci, Inst Vegetable Res, Changsha, Peoples R China.

通讯机构：

[Fei, ZJ ; Wu, S] B

[Zou, XX ] H

Hunan Agr Univ, Coll Hort, Engn Res Ctr Germplasm Innovat & New Varieties Bre, Key Lab Vegetable Biol Hunan Prov, Changsha, Peoples R China.

Boyce Thompson Inst Plant Res, Ithaca, NY USA.

USDA Agr Res Serv, Robert W Holley Ctr Agr & Hlth, Ithaca, NY 14853 USA.

语种：

英文

期刊：

Nature Communications

ISSN：

2041-1723

年：

2023

卷：

期：

页码：

5487

DOI：

10.1038/s41467-023-41251-4

基金类别：

National Science Foundation (NSF) [NT2021004]; Laboratory of Lingnan Modern Agriculture Project [U19A2028, U21A20230, 32130097]; National Natural Science Foundation of China [2021NK1006, 2021JC0007]; Science and Technology Innovation Program of Hunan Province, China [IOS-1855585]; US National Science Foundation

机构署名：

本校为第一且通讯机构

院系归属：

园艺园林学院

摘要：

Pepper (Capsicum spp.) is one of the earliest cultivated crops and includes five domesticated species, C. annuum var. annuum, C. chinense, C. frutescens, C. baccatum var. pendulum and C. pubescens. Here, we report a pepper graph pan-genome and a genome variation map of 500 accessions from the five domesticated Capsicum species and close wild relatives. We identify highly differentiated genomic regions among the domesticated peppers that underlie their natural variations in flowering time, characteristic flavors, and unique resistances to biotic and abiotic stresses. Domestication sweeps detect...

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Genomes of cultivated and wild Capsicum species provide insights into pepper domestication and population differentiation

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