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Molecular Docking Based Optimization Method of PSO and GA for Inhibition Mechanism Analysis of Tiliroside towards CYP2C9

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成果类型:
期刊论文
作者:
Ding, Dehong;Fang, Kui*;Deze, Qin;Bo, Liu;Bo, Qiao
通讯作者:
Fang, Kui
作者机构:
[Deze, Qin; Ding, Dehong] HeZhou Univ, Coll Comp Sci & Informat Technol, Hezhou 542800, Peoples R China.
[Fang, Kui; Bo, Liu; Bo, Qiao; Ding, Dehong] Hunan Agr Univ, Coll Informat Sci & Technol, Changsha 410128, Hunan, Peoples R China.
通讯机构:
[Fang, Kui] H
Hunan Agr Univ, Coll Informat Sci & Technol, Changsha 410128, Hunan, Peoples R China.
语种:
英文
关键词:
Agricultural resources;CYP2C9;Drug-drug interaction;Molecular docking;PSO and GA;Tiliroside;Virtual screening;Warfarin
期刊:
LATIN AMERICAN JOURNAL OF PHARMACY
ISSN:
0326-2383
年:
2014
卷:
33
期:
7
页码:
1229-1232
基金类别:
General scientific research projects in Hunan Province department of education, China [14C0542]; Hunan Province [CX2014B306]; Guangxi Experiment Centre of Science and Technology [LGZXKF201112]
机构署名:
本校为通讯机构
院系归属:
信息科学技术学院
摘要:
The inhibition mechanism of tiliroside towards CYP2C9 was elucidated using molecular docking methods. Protein data bank (http://www.rcsb.org/pdb) is the source of CYP2C9, which PDB code is 1OG5. The structure was processed using the protein preparation wizard in the Schrödinger suite of programs, the missing residues in the middle of the chain was added, and hydrogen atoms were assigned. The two-dimensional structure of tiliroside was drawn using ChemDraw software with standard lengths and angles. Warfarin was firstly removed from the active s...

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