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Dynamic biclustering of microarray data by multi-objective immune optimization

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成果类型:
期刊论文、会议论文
作者:
Liu, Junwan*;Li, Zhoujun;Hu, Xiaohua;Chen, Yiming;Park, E. K.
通讯作者:
Liu, Junwan
作者机构:
[Liu, Junwan] Cent S Univ Forestry & Technol, Sch Comp & Informat Engn, Changsha 410004, Hunan, Peoples R China.
[Li, Zhoujun] Beihang Univ, State Key Lab Software Dev Environm, Beijing 100191, Peoples R China.
[Li, Zhoujun] BeiHang Univ, Beijing Key Lab Network Technol, Beijing 100191, Peoples R China.
[Hu, Xiaohua] Drexel Univ, Coll Informat Sci & Technol, Philadelphia, PA 19104 USA.
[Chen, Yiming] Hunan Agr Univ, Sch Informat Sci & Technol, Changsha 410128, Hunan, Peoples R China.
通讯机构:
[Liu, Junwan] C
Cent S Univ Forestry & Technol, Sch Comp & Informat Engn, Changsha 410004, Hunan, Peoples R China.
语种:
英文
关键词:
Pareto Front;Pareto Optimal Solution;Microarray Dataset;Human Dataset;Yeast Dataset
期刊:
BMC Genomics
ISSN:
1471-2164
年:
2011
卷:
12
期:
2
页码:
1-7
会议名称:
IEEE International Conference on Bioinformatics and Biomedicine
会议时间:
DEC 18-21, 2010
会议地点:
Hong Kong, PEOPLES R CHINA
会议主办单位:
[Liu, Junwan] Cent S Univ Forestry & Technol, Sch Comp & Informat Engn, Changsha 410004, Hunan, Peoples R China.^[Li, Zhoujun] Beihang Univ, State Key Lab Software Dev Environm, Beijing 100191, Peoples R China.^[Li, Zhoujun] BeiHang Univ, Beijing Key Lab Network Technol, Beijing 100191, Peoples R China.^[Hu, Xiaohua] Drexel Univ, Coll Informat Sci & Technol, Philadelphia, PA 19104 USA.^[Chen, Yiming] Hunan Agr Univ, Sch Informat Sci & Technol, Changsha 410128, Hunan, Peoples R China.^[Park, E. K.] CSI CUNY, Staten Isl, NY USA.
会议赞助商:
IEEE
出版地:
CAMPUS, 4 CRINAN ST, LONDON N1 9XW, ENGLAND
出版者:
BMC
基金类别:
This work was supported by the National Natural Science Foundation of China (60973105), the fund of the State Key Laboratory of Software Development Environment, Scientific Research Fund of Hunan Provincial Education Department (09A105), Talents Import Fund of Central South University of Forestry and Technology (104-0177), NSF CCF 0905291 and NSF CCF 1049864 This article has been published as part of BMC Genomics Volume 12 Supplement 2, 2011: Selected articles from the IEEE International Conference on Bioinformatics and Biomedicine 2010. The full contents of the supplement are available online at http://www.biomedcentral.com/1471-2164/12?issue=S2.
机构署名:
本校为其他机构
院系归属:
信息科学技术学院
摘要:
Background: Newly microarray technologies yield large-scale datasets. The microarray datasets are usually presented in 2D matrices, where rows represent genes and columns represent experimental conditions. Systematic analysis of those datasets provides the increasing amount of information, which is urgently needed in the post-genomic era. Biclustering, which is a technique developed to allow simultaneous clustering of rows and columns of a dataset, might be useful to extract more accurate information from those datasets. Biclustering requires t...

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