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Comprehensive identification of protein orthologs in the family Ascoviridae facilitates an understanding of phylogenomics, protein conservation, and phosphorylation

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成果类型:
期刊论文
作者:
Shi, Yanhua;Lin, Weiping;Chu, Jinxin;Wang, Guohui;Zhao, Punan;...
通讯作者:
Hou, DH;Huang, GH
作者机构:
[Hou, DH; Shi, Yanhua; Wang, Guohui; Hou, Dianhai; Chu, Jinxin; Lin, Weiping; Zhao, Punan] Weifang Med Univ, Sch Life Sci & Technol, Weifang 261053, Peoples R China.
[Huang, GH; Huang, Guo-hua] Hunan Agr Univ, Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Changsha 410128, Hunan, Peoples R China.
通讯机构:
[Hou, DH ] W
[Huang, GH ] H
Weifang Med Univ, Sch Life Sci & Technol, Weifang 261053, Peoples R China.
Hunan Agr Univ, Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Changsha 410128, Hunan, Peoples R China.
语种:
英文
期刊:
Archives of Virology
ISSN:
0304-8608
年:
2022
卷:
167
期:
4
页码:
1075-1087
基金类别:
This research was funded by the Shandong Provincial Natural Science Foundation (No. ZR2020QC014), the National Natural Science Foundation of China (No. 31872027), and the Doctoral Fund of Weifang Medical University (No. 02181801). We also thank LetPub ( www.letpub.com ) for its linguistic assistance during the preparation of this manuscript.
机构署名:
本校为通讯机构
院系归属:
植物保护学院
摘要:
Analysis of orthology is important for understanding protein conservation, function, and phylogenomics. In this study, we performed a comprehensive analysis of gene orthology in the family Ascoviridae based on identification of 366 protein homologue groups and phylogenetic analysis of 34 non-single-copy proteins. Our findings revealed 90 newly annotated proteins, five newly identified core proteins for the family Ascoviridae, and 14 core proteins for the genus Ascovirus. A phylogenomic tree of 11 Ascoviridae members was constructed based on a concatenation of 35 of the 45 ortholog groups. In c...

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